A C D E F G H I J K L M N O P R S T U V W X Y

S

saveSVD(File) - Method in class tml.vectorspace.factorisation.SpaceDecomposition

saveSVD(File) - Method in class tml.vectorspace.SVD

scale(Instances) - Method in class tml.vectorspace.factorisation.MultiDimensionalScalingNR

scale(Instances) - Method in class tml.vectorspace.factorisation.PrincipalCoordinateAnalysis

searchDocTable() - Method in class tml.annotators.AnnotatorManager

SearchResultsCorpus - Class in tml.corpus

This class represents a general corpus where any search criteria can be used

SearchResultsCorpus(String) - Constructor for class tml.corpus.SearchResultsCorpus

SemanticSpace - Class in <Unnamed>

This class implements the integration with Matlab for TML

SemanticSpace(String, String) - Constructor for class SemanticSpace

Creates a new instance of a SemanticSpace, the space will be created with all text documents found in a particular folder.

SemanticSpace - Class in tml.vectorspace

This class is a Vector Space Model representation of a group of documents or Corpus constructed using Latent Semantic Indexing, it contains a term by document matrix for the Corpus.

SemanticSpace(Corpus) - Constructor for class tml.vectorspace.SemanticSpace

Creates a new SemanticSpace from a Corpus.

sendQuery(String, String) - Method in class tml.utils.DBUtils

sendQuery(String) - Method in class tml.utils.JDBCUtils

sendUpdate(String) - Method in class tml.utils.DBUtils

sendUpdate(String) - Method in class tml.utils.JDBCUtils

SentenceCorpus - Class in tml.corpus

Class representing a corpus formed with the sentences of a document

SentenceCorpus(TextDocument) - Constructor for class tml.corpus.SentenceCorpus

setAction(String) - Method in class tml.storage.RepositoryEvent

setAnnotation(String, String, String) - Method in class tml.sql.DbConnection

setBackgroundKnowledgeCorpus(Corpus) - Method in class tml.vectorspace.operations.AbstractOperation

setBackgroundKnowledgeCorpus(Corpus) - Method in interface tml.vectorspace.operations.Operation

setCluster(int) - Method in class tml.vectorspace.operations.results.PassageClusteringLingoResult

setClusterPhrase(String) - Method in class tml.vectorspace.operations.results.PassageClusteringLingoResult

setComment(String) - Method in class tml.vectorspace.operations.results.SummaryResult

setConcept(boolean) - Method in class tml.corpus.Term

setConceptA(String) - Method in class tml.vectorspace.operations.results.RelationshipExtractionResult

setConceptB(String) - Method in class tml.vectorspace.operations.results.RelationshipExtractionResult

setConnection() - Method in class tml.utils.DBUtils

setCorpus(Corpus) - Method in class tml.vectorspace.operations.AbstractOperation

setCorpus(Corpus) - Method in interface tml.vectorspace.operations.Operation

setCorpus(Corpus) - Method in class tml.vectorspace.operations.summarization.LatentSemanticAnalysisSummarization

setCorpus(Corpus) - Method in class tml.vectorspace.SemanticSpace

setCurrent(int) - Method in class tml.storage.RepositoryEvent

setDbAnnotations(boolean) - Method in class tml.corpus.Corpus

setDebugMode(boolean) - Static method in class tml.Configuration

setDiffGradeLevel(double) - Method in class tml.vectorspace.operations.results.ReadabilityResult

setDiffReadingEase(double) - Method in class tml.vectorspace.operations.results.ReadabilityResult

setDimensionalityReduction(CorpusParameters.DimensionalityReduction) - Method in class tml.corpus.CorpusParameters

setDimensionalityReductionCriteria(int, double) - Method in class SemanticSpace

Sets the criteria to select how many dimension will be kept after SVD

setDimensionalityReductionThreshold(double) - Method in class tml.corpus.CorpusParameters

setDirected(boolean) - Method in class tml.vectorspace.operations.results.RelationshipExtractionResult

setDistance(double) - Method in class tml.vectorspace.operations.results.PassageDistancesResult

setDistanceMeasure(DistanceLib.DistanceMeasure) - Method in class tml.vectorspace.factorisation.PrincipalCoordinateAnalysis

setDocStats(Stats[]) - Method in class tml.corpus.Corpus

setDocument(String) - Method in class tml.vectorspace.operations.results.LexiconAnalysisResult

setDocumentA(String) - Method in class tml.vectorspace.operations.results.PassageSimilarityResult

setDocumentAId(int) - Method in class tml.vectorspace.operations.results.PassageDistancesResult

setDocumentB(String) - Method in class tml.vectorspace.operations.results.PassageSimilarityResult

setDocumentBId(int) - Method in class tml.vectorspace.operations.results.PassageDistancesResult

setDocuments(List<String>) - Method in class tml.vectorspace.operations.results.PassageClusteringLingoResult

setDriver(String) - Method in class tml.utils.DBUtils

setEigenVectorIndex(int) - Method in class tml.vectorspace.operations.results.PassageExtractionSummarizationResult

setEigenVectorIndex(int) - Method in class tml.vectorspace.operations.results.TermsExtractionSummarizationResult

setEncoding(String) - Method in class tml.storage.Repository

Sets the character encoding that will be used in this repository

setExecPath(String) - Method in class tml.storage.Repository

setFleshKincaidGradeLevel(double) - Method in class tml.vectorspace.operations.results.ReadabilityResult

setFleshReadingEase(double) - Method in class tml.vectorspace.operations.results.ReadabilityResult

setGrammarErrors(List<RuleMatch>) - Method in class tml.vectorspace.operations.results.GrammarCheckerResult

setHardWords(ArrayList<String>) - Method in class tml.vectorspace.operations.results.ReadabilityResult

setHighDimensionlDistanceMeasure(DistanceLib.DistanceMeasure) - Method in class tml.vectorspace.factorisation.MultiDimensionalScalingNR

setIncludeBackgroundInResults(boolean) - Method in class tml.vectorspace.operations.PassagesSimilarity

setIncludeBackgroundInSimilarity(boolean) - Method in class tml.vectorspace.operations.PassagesSimilarity

setIndex(int) - Method in class tml.corpus.Term

Changes the value of the index for the Term within a Corpus

setIndex(double) - Method in class tml.vectorspace.operations.results.ParagraphCoherenceIndexResult

setInitialX(Instances) - Method in class tml.vectorspace.factorisation.MultiDimensionalScalingNR

setItem(String) - Method in class tml.vectorspace.operations.results.SummaryResult

setK(int) - Method in class tml.vectorspace.factorisation.MatrixFactorisation

setKeyword(String) - Method in class tml.vectorspace.operations.results.RapidAutomaticKeywordExtractionResult

setLanczosSVD(boolean) - Method in class tml.corpus.CorpusParameters

setLexicalized(boolean) - Method in class tml.annotators.PennTreeAnnotator

setLinkingWord(String) - Method in class tml.vectorspace.operations.results.RelationshipExtractionResult

setLoad(double) - Method in class tml.vectorspace.operations.results.PassageExtractionSummarizationResult

setLoad(double) - Method in class tml.vectorspace.operations.results.TermsExtractionSummarizationResult

setLoadThreshold(double) - Method in class tml.vectorspace.operations.PassageExtractionSummarization

setLowDimensionalDistanceMeasure(DistanceLib.DistanceMeasure) - Method in class tml.vectorspace.factorisation.MultiDimensionalScalingNR

setMaxDocuments(int) - Method in class tml.corpus.CorpusParameters

setMaxDocumentsToIndex(int) - Method in class tml.storage.Repository

setMaxFilesToProcess(int) - Method in class tml.storage.TmlIndexerTask

setMaximum(int) - Method in class tml.storage.RepositoryEvent

setMaxIterations(int) - Method in class tml.vectorspace.factorisation.MultiDimensionalScalingNR

setMaxIterations(int) - Method in class tml.vectorspace.factorisation.NonnegativeMatrixFactorisationKL

setMaxIterations(int) - Method in class tml.vectorspace.factorisation.ProbabilisticLatentSemanticAnalysis

setMaxResults(int) - Method in class tml.vectorspace.operations.AbstractOperation

Sets the maximum results the operation will return

setMaxResults(int) - Method in interface tml.vectorspace.operations.Operation

setMaxSizePixels(int) - Method in class tml.vectorspace.operations.visualizations.TagClouds

setName(String) - Method in class tml.corpus.Corpus

setName(String) - Method in class tml.vectorspace.operations.results.FactorAnalysisPlotResult

setNewTerms(int) - Method in class tml.vectorspace.operations.results.LexiconAnalysisResult

setNormalizeDocuments(boolean) - Method in class tml.corpus.CorpusParameters

setOperation(Operation<?>) - Method in class tml.vectorspace.operations.visualizations.AbstractVisualization

setOperation(Operation<?>) - Method in interface tml.vectorspace.operations.visualizations.Visualization

setParagraphId(String) - Method in class tml.vectorspace.operations.results.ParagraphCoherenceIndexResult

setParameters(CorpusParameters) - Method in class tml.corpus.Corpus

setParameters(CorpusParameters) - Method in class tml.corpus.TextDocument

setPassage(String) - Method in class tml.vectorspace.operations.results.LastPassageResult

setPassagesLoads(double[]) - Method in class tml.vectorspace.operations.results.Summary

setPassagesRank(int[]) - Method in class tml.vectorspace.operations.results.Summary

setProjection(boolean) - Method in class tml.corpus.Corpus

setProperties(Properties) - Static method in class tml.Configuration

Set TML properties

setRank(double) - Method in class tml.vectorspace.operations.results.TermRankedResult

setReview(String, String, String, String) - Method in class tml.sql.DbConnection

setSimilarity(double) - Method in class tml.vectorspace.operations.results.PassageSimilarityResult

setSkdata(double[][]) - Method in class tml.vectorspace.factorisation.SpaceDecomposition

setSkdata(double[][]) - Method in class tml.vectorspace.SVD

setSortBySimilarity(boolean) - Method in class tml.vectorspace.operations.PassagesSimilarity

setTerm(String) - Method in class tml.vectorspace.operations.results.TagCloudsResult

setTerm(String) - Method in class tml.vectorspace.operations.results.TermRankedResult

setTerm(String) - Method in class tml.vectorspace.operations.results.TermsExtractionSummarizationResult

setTermEntropies(double[]) - Method in class tml.corpus.Corpus

setTermId(int) - Method in class tml.vectorspace.operations.results.TermsExtractionSummarizationResult

setTerms(int) - Method in class tml.vectorspace.operations.results.LexiconAnalysisResult

setTermSelectionCriteria(int, double) - Method in class SemanticSpace

Sets the criteria to select which terms will be included in the LSA space

setTermSelectionCriterion(CorpusParameters.TermSelection) - Method in class tml.corpus.CorpusParameters

setTermSelectionThreshold(double) - Method in class tml.corpus.CorpusParameters

setTermsLoads(double[]) - Method in class tml.vectorspace.operations.results.Summary

setTermsRank(int[]) - Method in class tml.vectorspace.operations.results.Summary

setTermStats(Stats[]) - Method in class tml.corpus.Corpus

setTermWeightGlobal(TermWeighting.GlobalWeight) - Method in class tml.corpus.CorpusParameters

setTermWeightingCriteria(int, int) - Method in class SemanticSpace

Sets the term weighting scheme that will be used to calculate the LSA space

setTermWeightLocal(TermWeighting.LocalWeight) - Method in class tml.corpus.CorpusParameters

setTextDocumentId(String) - Method in class tml.vectorspace.operations.results.GrammarCheckerResult

setTextPassageContent(String) - Method in class tml.vectorspace.operations.results.PassageExtractionSummarizationResult

setTextPassageContent(String) - Method in class tml.vectorspace.operations.results.ReadabilityResult

setTextPassageId(int) - Method in class tml.vectorspace.operations.results.PassageExtractionSummarizationResult

setTextPassageId(int) - Method in class tml.vectorspace.operations.results.ReadabilityResult

setTmlFolder(String) - Static method in class tml.Configuration

setTolerence(double) - Method in class tml.vectorspace.factorisation.MultiDimensionalScalingNR

setTolerence(double) - Method in class tml.vectorspace.factorisation.ProbabilisticLatentSemanticAnalysis

setUkdata(double[][]) - Method in class tml.vectorspace.factorisation.SpaceDecomposition

setUkdata(double[][]) - Method in class tml.vectorspace.SVD

setUpBeforeClass() - Static method in class tml.test.AbstractTmlIndexingTest

setUpBeforeClass() - Static method in class tml.test.AbstractTmlOperationTest

setUploadFolder(String) - Method in class tml.storage.TmlIndexerTask

setValue(String) - Method in class tml.vectorspace.operations.results.SummaryResult

setVariance(double) - Method in class tml.vectorspace.operations.results.TermsExtractionSummarizationResult

setVk(Matrix) - Method in class tml.vectorspace.SemanticSpace

setVkdata(double[][]) - Method in class tml.vectorspace.factorisation.SpaceDecomposition

setVkdata(double[][]) - Method in class tml.vectorspace.SVD

setWeight(double) - Method in class tml.vectorspace.operations.results.TagCloudsResult

setWeighting(Double) - Method in class tml.vectorspace.operations.results.RapidAutomaticKeywordExtractionResult

setX(double) - Method in class tml.vectorspace.operations.results.FactorAnalysisPlotResult

setY(double) - Method in class tml.vectorspace.operations.results.FactorAnalysisPlotResult

SimpleCorpus - Class in tml.corpus

SimpleCorpus is a simple corpus which contains a set of documents from a folder, it consider each document a vector.

SimpleCorpus(String, String) - Constructor for class tml.corpus.SimpleCorpus

SimpleCorpus(String, String, boolean) - Constructor for class tml.corpus.SimpleCorpus

SingularValueDecomposition - Class in tml.vectorspace.factorisation

SingularValueDecomposition() - Constructor for class tml.vectorspace.factorisation.SingularValueDecomposition

SpaceDecomposition - Class in tml.vectorspace.factorisation

SpaceDecomposition() - Constructor for class tml.vectorspace.factorisation.SpaceDecomposition

StanfordUtils - Class in tml.utils

Class to consolidate the calls to the Stanford parser

StanfordUtils() - Constructor for class tml.utils.StanfordUtils

start() - Method in class tml.vectorspace.operations.AbstractOperation

start() - Method in class tml.vectorspace.operations.CompoundNounsSummarized

start() - Method in class tml.vectorspace.operations.ConceptExtraction

start() - Method in class tml.vectorspace.operations.FactorAnalysisPlot

start() - Method in class tml.vectorspace.operations.GrammarChecker

start() - Method in class tml.vectorspace.operations.LastPassage

start() - Method in class tml.vectorspace.operations.LexiconAnalysis

start() - Method in interface tml.vectorspace.operations.Operation

Starts the operation execution

start() - Method in class tml.vectorspace.operations.ParagraphCoherenceIndex

start() - Method in class tml.vectorspace.operations.PassageDistances

start() - Method in class tml.vectorspace.operations.PassageExtractionSummarization

start() - Method in class tml.vectorspace.operations.PassagesSimilarity

start() - Method in class tml.vectorspace.operations.RapidAutomaticKeywordExtraction

start() - Method in class tml.vectorspace.operations.Readability

Start the operation (non-Javadoc)

start() - Method in class tml.vectorspace.operations.RelationshipExtraction

start() - Method in class tml.vectorspace.operations.summarization.AbstractSummarizationOperation

start() - Method in class tml.vectorspace.operations.Summary

start() - Method in class tml.vectorspace.operations.TagClouds

start() - Method in class tml.vectorspace.operations.TermExtractionSummarization

Stats - Class in tml.utils

A class to store simple statistics

Stats() - Constructor for class tml.utils.Stats

stdDev - Variable in class tml.utils.Stats

The std deviation of values at the last calculateDerived() call

stemWords(String) - Method in class SemanticSpace

Stemming words with Lucene and making it available in Matlab

stemWords(String) - Static method in class tml.utils.LuceneUtils

stringContained(String, String) - Static method in class tml.utils.RegexUtils

stringIsContainedInList(List<String>, String) - Static method in class tml.utils.RegexUtils

subtract(double) - Method in class tml.utils.Stats

Removes a value to the observed values (no checking is done that the value being removed was actually added).

subtract(double, double) - Method in class tml.utils.Stats

Subtracts a value that has been seen n times from the observed values

sum - Variable in class tml.utils.Stats

The sum of values seen

SummarizationOperation - Interface in tml.vectorspace.operations.summarization

Summary - Class in tml.vectorspace.operations.results

Summary() - Constructor for class tml.vectorspace.operations.results.Summary

Summary - Class in tml.vectorspace.operations

This operation returns several descriptive statistics on the corpus.

Summary() - Constructor for class tml.vectorspace.operations.Summary

SummaryResult - Class in tml.vectorspace.operations.results

SummaryResult() - Constructor for class tml.vectorspace.operations.results.SummaryResult

sumSq - Variable in class tml.utils.Stats

The sum of values squared seen

SVD - Class in tml.vectorspace

SVD() - Constructor for class tml.vectorspace.SVD